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Genome Intelligence
BINF 6203
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Lab 2: Genome Annotation and Comparison
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UPDATED: Sequence Assembly
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Updated: NGS QC
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New computer setup: Apple
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Read mapping and simple variants
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Microbial community analysis with QIIME2
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Whole genome shotgun metagenomics with MetaPhLan
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Gene expression analysis with DE-Seq
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Expression quantitation with featurecounts
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Read mapping and variant calling
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